PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 195409
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas; Micromonas pusilla
Family C2H2
Protein Properties Length: 605aa    MW: 63309.1 Da    PI: 4.6814
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
195409genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.8e-05226247223
              EETTTTEEESSHHHHHHHHHHT CS
  zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
              +C +C++ F +  nL rH ++H
   195409 226 RCDKCKRAFASTTNLARHRQSH 247
              6******************999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.45225252IPR007087Zinc finger, C2H2
PROSITE patternPS000280227247IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    Send to blast
MKGSVTVVDA DVAGDVATTG GADGNKEDAG IVVADAYDFD ASPEAAAAAR LEKRAENRER  60
RVRAAEEEKA RATRAAEGMM REIESRAQAE AATLFSSDDD DDDDNDGNGG TNGTPYAALA  120
SSDDEEAEEA AAMNTTTTET TEIEIETEVE TKWRLEVEER EASRPVTVSQ LLERTNERRL  180
SATLSETSSG RGSGANLPET AGLSPLSSTF SSSSIPVPTH PTPTARCDKC KRAFASTTNL  240
ARHRQSHRFD GKSGRHGKPF VPPATREQLA ACWRNLCAET RREVLDLGVG GEAGVLVLTA  300
FASRGPGSFA LVSSGVNNKD LNGDVPADGG SGDVRARYAA AGDVLRTYVD GDVNVAKTVD  360
ADAFLTALHD ASEGGFLGPK CAVDLSSMVS ERNLEAALAL LLEERLMRAY VKERGAEAER  420
TQRLLMAELD EAAADKERRE AQKMKMKAKK AKQKSRKRAG AGAGAGAGAT ETGGKSTAHD  480
SDGDDDRGGD GDGGGGVDDD VDEDARREEE KRRAEAEERA AASEREHRRN EAAAAAAAAE  540
YAEREAREAV ARARRRESAA KAVEAAAETT TEAAAAFAVG GGALAASPYG KGRAKTAAAA  600
AAAAA